Applying the suggestion (in comments) from Paramanand Singh we get:
$$\begin{align}
\int \limits_1^\infty \Bigg( \frac{\lceil x \rceil}{x^2} - \frac{1}{\lfloor x \rfloor} \Bigg) \ dx
&= \sum_{n=1}^\infty \int \limits_n^{n+1} \Bigg( \frac{\lceil x \rceil}{x^2} - \frac{1}{\lfloor x \rfloor} \Bigg) \ dx \\[6pt]
&= \sum_{n=1}^\infty \int \limits_n^{n+1} \Bigg( \frac{n+1}{x^2} - \frac{1}{n} \Bigg) \ dx \\[6pt]
&= \sum_{n=1}^\infty \Bigg[ - \frac{n+1}{x} - \frac{x}{n} \Bigg]_{x=n}^{x=n+1} \\[6pt]
&= \sum_{n=1}^\infty \Bigg[ \Bigg( - \frac{n+1}{n+1} - \frac{n+1}{n} \Bigg) - \Bigg( - \frac{n+1}{n} - \frac{n}{n} \Bigg) \Bigg] \\[6pt]
&= \sum_{n=1}^\infty \Bigg[ \Bigg( - 2 - \frac{1}{n} \Bigg) - \Bigg( - 2 - \frac{1}{n} \Bigg) \Bigg] \\[6pt]
&= \sum_{n=1}^\infty 0 = 0. \\[6pt]
\end{align}$$
The equivalence of the two integrals in question follows simply from here, which establishes the latter representation of the Euler-Mascheroni constant.