NOT AN ANSWER. An extended discussion to restate the question being asked, which won't fit as a comment
OP uses $n$ both as the name for joker numbers and as the primary index of primes. For clarity, I will avoid using $n$ as the primary index of primes.
A number $n$ with $3$ or more prime factors can have at most one prime factor larger than $\sqrt{n}$; if it had more than one such prime factor, their product alone would be greater than $n$. Thus if $n$ has $3$ or more prime factors, at least two of them must be smaller than $\sqrt{n}$. The only way that such a number might be a joker number is if the two prime factors $p_a$ smaller than $\sqrt{n}$ are equal: $n=(p_a)^2\cdot c$. Then $\sqrt{n}=p_a\sqrt{c}$ where $c$ has prime factors $\ge p_a$.
Specific cases: $p_a=c=2$ affords the noted exception $n=8$. $p_a=2,\ c=3 \Rightarrow n=12$, and $12$ is not a joker number by examination. $p_a\ge 3 \Rightarrow n\ge 27$, and since $27>25=p_{a+1}^2$, this affords no joker numbers. $c\ge 4 \Rightarrow p_a\sqrt{c}\ge 2p_a$ and by Bertrand's postulate, $p_a$ is not the smallest prime $\le \sqrt{n}$. Since $n$ has at least $2$, and (excepting $8$) cannot have $3$ or more prime factors, $n$ is a semiprime.
For any particular $p_a$, the joker numbers containing it as a prime factor lie within the interval $(p_a)^2$ to $(p_{a+1})^2$. OP's question can be stated: Let $k$ be the count of numbers in that interval that are products $p_ap_b$ such that $p_a<p_b<\frac{(p_{a+1})^2}{p_a}$; does there always exist $p_a$ such that $k$ can be arbitrarily large?
Let $p_{a+1}=p_a+g_a$, where $g_a$ is the gap between $p_a$ and $p_{a+1}$. Then acceptable $p_b$ to be counted are defined as $p_a<p_b<\frac{(p_{a}+g_a)^2}{p_a}=p_a+2g_a+\frac{g_a^2}{p_a}$. For sufficiently large $p_a$ we can consider $\frac{g_a^2}{p_a}$ to be an error term. We also know that there is only one prime to be counted within the interval from $p_a$ to $p_{a+1}$. So the question becomes: In the interval from $p_{a+1}$ to $p_{a+1}+g_a$, can there be arbitrarily many prime numbers?
At this time, I don't have an answer to that question.