$$S=\sum_{n=1}^\infty\frac{\overline{H}_nH_{n/2}}{n^2}=H_{1/2}+\sum_{n=2}^\infty\frac{\overline{H}_nH_{n/2}}{n^2},\quad H_{1/2}=2-2\ln2$$
notice that
$$\sum_{n=2}^\infty f(n)=\sum_{n=1}^\infty f(2n)+\sum_{n=1}^\infty f(2n+1)$$
therefore
$$S=H_{1/2}+\frac14\sum_{n=1}^\infty\frac{\overline{H}_{2n}H_{n}}{n^2}+\sum_{n=1}^\infty\frac{\overline{H}_{2n+1}H_{n+1/2}}{(2n+1)^2}$$
$$S=2-2\ln2+\frac14S_1+S_2\tag{*}$$
For $S_1$, use $\overline{H}_{2n}=H_{2n}-H_n$
$$\Longrightarrow S_1=\sum_{n=1}^\infty\frac{{H}_{2n}H_{n}}{n^2}-\sum_{n=1}^\infty\frac{H_{n}^2}{n^2}$$
For $S_2$, use: $$\overline{H}_{2n+1}=H_{2n+1}-H_n$$
$$H_{n+1/2}=2H_{2n}-H_n+\frac2{2n+1}-2\ln2$$
so
$$\overline{H}_{2n+1}H_{n+1/2}\\=2H_{2n}^2+H_n^2-3H_{2n}H_n-2\ln2H_{2n}+2\ln2H_n+\frac{4H_{2n}}{2n+1}-\frac{3H_n}{2n+1}-\frac{2\ln2}{2n+1}+\frac{2}{(2n+1)^2}$$
$$\Longrightarrow S_2=2\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n+1)^2}+\sum_{n=1}^\infty\frac{H_{n}^2}{(2n+1)^2}-3\color{orange}{\sum_{n=1}^\infty\frac{H_{2n}H_n}{(2n+1)^2}}$$
$$-2\ln2\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^2}+2\ln2\sum_{n=1}^\infty\frac{H_{n}}{(2n+1)^2}+4\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^3}$$
$$-3\sum_{n=1}^\infty\frac{H_{n}}{(2n+1)^3}-2\ln2\underbrace{\sum_{n=1}^\infty\frac{1}{(2n+1)^3}}_{\large \frac{7}{8}\zeta(3)-1}+2\underbrace{\sum_{n=1}^\infty\frac{1}{(2n+1)^4}}_{\large \frac{15}{16}\zeta(4)-1}$$
The orange sum can be extracted from the equality provided by @user97357329 in his solution above
$$3\color{orange}{\sum_{n=1}^\infty\frac{H_{2n}H_n}{(2n+1)^2}}$$
$$\small{=\frac34\sum_{n=1}^\infty\frac{H_{2n}H_n}{n^2}+6\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n+1)^2}+6\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^3}-\frac34\sum_{n=1}^\infty\frac{H_{2n}^2}{n^2}-\frac34\sum_{n=1}^\infty\frac{H_{2n}^{(2)}}{n^2}-6\ln2\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^2}}$$
plugging this result in $S_2$ gives
$$S_2=2\ln2\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^2}}-3\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^3}}$$
$$-4\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n+1)^2}}-2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^3}}+4\ln2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^2}}+\frac34\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{n^2}}+\frac34\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^{(2)}}{n^2}}$$
$$-\frac34\sum_{n=1}^\infty\frac{H_{2n}H_n}{n^2}+\sum_{n=1}^\infty\frac{H_{n}^2}{(2n+1)^2}-\frac74\ln2\zeta(3)+\frac{15}8\zeta(4)+2\ln2-2$$
Now plug $S_1$ and $S_2$ in $(*)$ we reach
$$S=2\ln2\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^2}}-3\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^3}}$$
$$-4\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n+1)^2}}-2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^3}}+4\ln2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^2}}+\frac34\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{n^2}}+\frac34\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^{(2)}}{n^2}}$$
$$-\frac12\sum_{n=1}^\infty\frac{H_{2n}H_n}{n^2}+\sum_{n=1}^\infty\frac{H_{n}^2}{(2n+1)^2}-\frac14\sum_{n=1}^\infty\frac{H_n^2}{n^2}-\frac74\ln2\zeta(3)+\frac{15}8\zeta(4)$$
Lets start with the easy ones, the blue sums can be calculated using the following generalization proved by @Random Variable here
$$ \sum_{n=1}^\infty\frac{H_n}{(n+a)^2}=\left(\gamma + \psi(a) \right) \psi_{1}(a) - \frac{\psi_{2}(a)}{2}$$
so
$$\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^2}}=\frac74\zeta(3)-\frac32\ln2\zeta(2)$$
$$\color{blue}{\sum_{n=1}^\infty\frac{H_n}{(2n+1)^3}}=\frac{45}{32}\zeta(4)-\frac74\ln2\zeta(3)$$
The red ones can be evaluated using the fact that
$$2\sum_{n=1}^\infty f(2n)=\sum_{n=1}^\infty f(n)(1+(-1)^n)$$
$$2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n+1)^2}}=\sum_{n=1}^\infty\frac{H_{n}^2}{(n+1)^2}+\sum_{n=1}^\infty\frac{(-1)^nH_{n}^2}{(n+1)^2}$$
$$=\sum_{n=1}^\infty\frac{H_{n-1}^2}{n^2}-\sum_{n=1}^\infty\frac{(-1)^nH_{n-1}^2}{n^2},\quad H_{n-1}=H_n-\frac1n$$
$$=\sum_{n=1}^\infty\frac{H_n^2}{n^2}-2\sum_{n=1}^\infty\frac{H_n}{n^3}+\sum_{n=1}^\infty\frac{1}{n^4}-\sum_{n=1}^\infty\frac{(-1)^nH_n^2}{n^2}+2\sum_{n=1}^\infty\frac{(-1)^nH_n}{n^3}-\sum_{n=1}^\infty\frac{(-1)^n}{n^4}$$
Similarly
$$2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^2}}=\sum_{n=1}^\infty\frac{H_n}{n^2}-\sum_{n=1}^\infty\frac{1}{n^3}-\sum_{n=1}^\infty\frac{(-1)^nH_n}{n^2}+\sum_{n=1}^\infty\frac{(-1)^n}{n^3}$$
$$2\color{red}{\sum_{n=1}^\infty\frac{H_{2n}}{(2n+1)^3}}=\sum_{n=1}^\infty\frac{H_n}{n^3}-\sum_{n=1}^\infty\frac{1}{n^4}-\sum_{n=1}^\infty\frac{(-1)^nH_n}{n^3}+\sum_{n=1}^\infty\frac{(-1)^n}{n^4}$$
$$\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^2}{n^2}}=4\sum_{n=1}^\infty\frac{H_{2n}^2}{(2n)^2}=2\sum_{n=1}^\infty\frac{H_{n}^2}{n^2}+2\sum_{n=1}^\infty\frac{(-1)^nH_{n}^2}{n^2}$$
$$\color{red}{\sum_{n=1}^\infty\frac{H_{2n}^{(2)}}{n^2}}=4\sum_{n=1}^\infty\frac{H_{2n}^{(2)}}{(2n)^2}=2\sum_{n=1}^\infty\frac{H_{n}^{(2)}}{n^2}+2\sum_{n=1}^\infty\frac{(-1)^nH_{n}^{(2)}}{n^2}$$
Evaluating $\displaystyle \sum_{n=1}^\infty\frac{H_n^2}{(2n+1)^2}$
Using the identity
$$\frac{\ln^2(1-x)}{1-x}=\sum_{n=1}^\infty (H_n^2-H_n^{(2)})x^n$$
replace $x$ with $x^2$, then multiply both sides by $-\ln x$ and integrate from $x=0$ to $1$ we get
$$\sum_{n=1}^\infty\frac{H_n^2-H_n^{(2)}}{(2n+1)^2}=-\underbrace{\int_0^1\frac{\ln x\ln^2(1-x^2)}{1-x^2}\ dx}_{\text{beta function}}=-3\ln^22\zeta(2)+7\ln2\zeta(3)-\frac{15}4\zeta(4)$$
From here we have
$$\sum_{n=1}^\infty\frac{H_n^{(2)}}{(2n+1)^2}=\frac13\ln^42-2\ln^22\zeta(2)+7\ln2\zeta(3)-\frac{121}{16}\zeta(4)+8\operatorname{Li}_4\left(\frac12\right)$$
$$\Longrightarrow \sum_{n=1}^\infty\frac{H_n^2}{(2n+1)^2}=\frac13\ln^42+\ln^22\zeta(2)-\frac{61}{16}\zeta(4)+8\operatorname{Li}_4\left(\frac12\right)$$
substitute the following results
$$\sum_{n=1}^\infty\frac{H_n}{n^2}=2\zeta(3)\tag1$$
$$\sum_{n=1}^\infty\frac{H_n}{n^3}=\frac54\zeta(4)\tag2$$
$$\sum_{n=1}^\infty\frac{(-1)^nH_n}{n^2}=-\frac58\zeta(3)\tag3$$
$$\sum_{n=1}^\infty\frac{(-1)^nH_n}{n^3}=2\operatorname{Li_4}\left(\frac12\right)-\frac{11}4\zeta(4)+\frac74\ln2\zeta(3)-\frac12\ln^22\zeta(2)+\frac{1}{12}\ln^42\tag4$$
$$\sum_{n=1}^\infty\frac{H_n^{(2)}}{n^2}=\frac{7}4\zeta(4)\tag5$$
$$\sum_{n=1}^\infty\frac{H_n^2}{n^2}=\frac{17}4\zeta(4)\tag6$$
$$\sum_{n=1}^{\infty}\frac{(-1)^nH_n^{(2)}}{n^2}=-4\operatorname{Li}_4\left(\frac12\right)+\frac{51}{16}\zeta(4)-\frac72\ln2\zeta(3)+\ln^22\zeta(2)-\frac16\ln^42\tag7$$
$$\sum_{n=1}^{\infty}\frac{(-1)^nH_n^2}{n^2}=2\operatorname{Li}_4\left(\frac12\right)-\frac{41}{16}\zeta(4)+\frac74\ln2\zeta(3)-\frac12\ln^22\zeta(2)+\frac1{12}\ln^42\tag8$$
$$\sum_{n=1}^{\infty}\frac{H_nH_{2n}}{n^2}=4\operatorname{Li_4}\left( \frac12\right)+\frac{13}{8}\zeta(4)+\frac72\ln2\zeta(3)-\ln^22\zeta(2)+\frac16\ln^42\tag9$$
we obtain the closed form of $S$.
References
$(1)$ and $(2)$ can be obtained using Euler identity, $(3)$ and $(4)$ can be found here, $(5)$ and $(6)$ can be found here, $(7)$ and $(8)$ can be found here and $(9)$ can be found here.