Important update Yam Mir has found a more general form and Mathlove has found a necessary condition but as of now the problem is still open.
Earlier I posted this pretty gross equality that I was trying to prove, $a,b,c,d,e,f \in \mathbb{N}-0, \gcd(a,b)=1 \ \wedge \ \gcd(c,d) = 1 \ \wedge \ \gcd(e,f) = 1, (a,b) \neq (c,d) \neq (e,f)$
$$\Rightarrow \frac{4a^3b-4ab^3}{a^4+2a^2b^2+b^4} + \frac{4c^3d-4cd^3}{c^4+2c^2d^2+d^4} \neq \frac{4e^3f-4ef^3}{e^4+2e^2f^2+f^4}$$
Which I completely missed some beautiful underlying math for,
I've found that the terms can be rewritten as such,
$$\frac{4m^3n-4mn^3}{m^4+2m^2n^2+n^4}=\frac{4mn(m-n)(m+n)}{(m^2+n^2)(m^2+n^2)} = \frac{4mn(m^2-n^2)}{(m^2+n^2)^2}$$
Since it is parameterized as $\gcd(a,b) = 1 \ \wedge \ a>b>0$. It can be parametrized as a primitive Pythagorean triple!
So now let,
$$a=2mn, b=m^2-n^2,c=m^2+n^2$$
we get,
$$\frac{2a_1b_1}{c_1^2}+\frac{2a_2b_2}{c_2^2} \neq \frac{2a_3b_3}{c^2_3}$$ Where $a_n,b_n,c_n$ form a primitive Pythagorean triple dividing by four yields,
$$\frac{ab}{2c^2} = \text{Area}\cdot\frac{1}{c^2}$$
For terminology sake let's call this the characteristic ratio of a primitive Pythagorean triple. My conjecture is that for all primitive Pythagoreon triples,
$$\frac{a_1b_1}{2c_1^2}+\frac{a_2b_2}{2c_2^2}\neq \frac{a_3b_3}{2c_3^2}$$
Interestingly I've found,
$$\frac{1}{c_n^2} \approx \frac{1}{4n^2\pi^2}$$
plotting ratios from the original equation gives this curve indicating some kind of cyclical phenomenon,
Another thing I've observed,
$$\max{\frac{2a_nb_n}{c_n^2}} = 1$$
Additionally the numerator of the original inequality appears to be all congruent numbers apart of this sequence! So to sum things up I'm trying to show that,
$$\frac{\text{Area}_1}{c_1^2} + \frac{\text{Area}_2}{c_2^2} \neq \frac{\text{Area}_3}{c_3^2}$$
For all primitive Pythagorean triples or find a counter example. I'd also like to know why this may be true and if there is any regularity to the cyclical phenomenon showed? Must these ratios be unique given that primitive triples are rooted in prime factorization? What geometric meaning can be drawn from $\frac{\text{Area}}{c^2}$, why the hypotenuse squared? (note these ratio's might also flirt with the Dirichlet L-function and or elliptic curves.)
Edit @mathlove found a counter example but I unfortunately wrote the wrong parameterization failing to list $a>b>0$ so I am still looking for a different counter example. The problem is still open
Edit for bounty: To be very specific about what I'm asking for, I'd like to prove $\frac{\text{Area}_1}{c_1^2}+\frac{\text{Area}_2}{c_2^2} \neq \frac{\text{Area}_3}{c_3^2}$ for all primitive Pythagorean triples or find a counter example. The other questions would be nice but is in no way a requirement to receive the bounty. This bounty will cost me almost $1/3$ of my reputation so even just commenting and sharing thoughts/ideas would go a long way.