Actually, the probability is defined on sets from a sigma-algebra on the universe (or sample space) $\Omega$. $P(X=x)$ is a shortcut for $P(\{\omega\in\Omega|X(\omega)=x\})$.
Likewise, $P(X>x)$ is a shortcut for $P(\{\omega\in\Omega|X(\omega)>x\})$.
A event is an element of this sigma-algebra.
A real random variable is simply a (measurable) function from $\Omega$ to $\Bbb R$.
Now, for the intuitive part, throw a die, and denote by $X$ the random variable being the number that appears on the top of the die, modulo $3$. The universe if $\Omega=\{1,2,3,4,5,6\}$. The sigma-algebra is the powerset of $\Omega$ and the random variable is the function defined by
- $X(1)=1$
- $X(2)=2$
- $X(3)=0$
- $X(4)=1$
- $X(5)=2$
- $X(6)=0$
What is $P(X>0)$? Intuitively, that means the "probability that $X$ is greater than $0$", or if you prefer the "probability that $X$ is $1$ or $2$", since $X$ can only take the values $0,1,2$.
More formally, the event $X>0$ is $\{1,2,4,6\}$, so really,
$$P(X>0)=P(\{1,2,4,6\})$$
Notice that I can't tell you the exact value of this probability, because I have still not defined it: you have to define a function (more precisely, a probability measure $P$ on the sigma-algebra described above. In the finite case, you can define the probability of every elementary event, that is $P(\{1\}), P(\{2\}), \dots, P(\{6\})$. It's quite customary in the case of a die to define $P(\{\omega\})=\frac16$ for all $\omega\in\Omega$, but it's not mandatory. If you choose this probability, then
$$P(X>0)=P(\{1,2,4,6\})=\frac46=\frac23$$
Likewise,
$$P(X=0)=P(\{3,6\})=\frac26=\frac13$$
Of course, you can check that $P(X=0)+P(X>0)=1$ here, as the events are the complement of one another.