As noted, the ultrafilter functor is an example; in fact, it is the terminal example, as shown by Reinhard Börger in this paper:
http://www.sciencedirect.com/science/article/pii/0022404987900417
All finite-coproduct-preserving endofunctors of $\mathbf{Set}$ are actually quite closely related to ultrafilters. Another basic example is as follows. If $\mathscr U$ is an ultrafilter on a set $A$, we can consider the ultrapower functor $(-)^{\mathscr U} \colon \mathbf{Set} \to \mathbf{Set}$. This sends a set $X$ to the quotient of $X^A$ by the equivalence relation wherein $\vec{x} \equiv \vec{y}$ just when $\{a \in A : x_a = y_a\} \in \mathscr U$ (i.e., when $\vec x = \vec y$ "$\mathscr U$-almost everywhere").
The ultrapower functors preserve finite coproducts (as well as finite limits). In fact, the ultrapower functors are basic in the sense that any finite-coproduct-preserving functor $\mathbf{Set} \to \mathbf{Set}$ is a colimit in $[\mathbf{Set}, \mathbf{Set}]$ of ultrapower functors.
Here is another example, again involving ultrafilters. Let $\mathbb{T}$ be any first-order theory and let $M$ and $N$ be models for $\mathbb{T}$. We can define a finite-coproduct-preserving functor $F_{M,N} \colon \mathbf{Set} \to \mathbf{Set}$ by taking
$$F_{M,N}(X) = \sum_{\mathscr U \in \beta X} \mathbf{Emb}(M^\mathscr{U}, N) $$
where here $\beta X$ is the set of ultrafilters on $X$; $M^{\mathscr U}$ is the ultrapower model of $\mathbb T$ (which is a model by Łoś's theorem); and $\mathbf{Emb}(M^{\mathscr U}, N)$ denotes the set of elementary embeddings of $M^{\mathscr U}$ in $N$.