You can illustrate it with a simple example :
Let $f : [0,1] \to [0,1]$ such that $f(x)= 0$ if $x \leq 1/2$ and $f(x)=1$ otherwise. Then, let $f_{\epsilon} : [0,1] \to [0,1]$ be such that $f(x)=0$ if $0 \leq x \leq \frac{1}{2}- \epsilon$, $f(x)= 1$ if $\frac{1}{2}+ \epsilon \leq x \leq 1$ and $f_{\epsilon}$ affine on $[1/2- \epsilon, 1/2+ \epsilon]$.
So $f_{\epsilon}$ is continuous and $\mu \{x : f(x) \neq f_{\epsilon}(x) \}=2 \epsilon$.
However, there is no continuous function $\phi$ such that $f=\phi$ almost everywhere. Indeed, if it was the case, there would be sequences $x_n < 1/2$ and $y_n > 1/2$ converging to $1/2$ and such that $f(x_n)=\phi(x_n)$, $\phi(y_n)=f(y_n)$ (otherwise $\{ x : f(x) \neq \phi(x) \}$ would contain an interval); for $n \to + \infty$, you find $0= \phi(1/2)=1$.